Chapter Two - Matter and Energy
I. Chemical Elements and Atomic Structure (p. 53)
A. Matter and the Elements (p. 53; Table 2.1; Fig. 2.1)
1. Matter has weight and occupies space, the simplest form of which is an element.
2. Each element can be identified by its atomic number, the number of protons in its nucleus.
3. There are 92 naturally occurring elements, six of which (O, C, H, N, Ca, and P) that account for 98.5% of the weight of the body.
4. Trace elements (Cr, Co, Cu, F, I, and Mn) play vital roles in physiology even though they make up only 0.8% of body weight.
5. The abundance of elements within the body is different than the relative quantities that occur in nature. The body is selective in its use of elements.
B. Atomic Structure (p. 54; Figs. 2.2, 2.3; Transp. 20; Table 2.2)
1. All matter is composed of atoms.
2. Atoms are made up of positively charged protons and neutral neutrons occupying the nucleus, and tiny, negatively-charged electrons in orbit around the nucleus.
3. Each proton or neutron weighs one atomic mass unit.
4. Atomic mass equals the number of protons plus the number of neutrons for an element.
5. Electrons determine the chemical properties of the atom.
6. When the number of protons and number of neutrons are equal, the atom is electrically neutral.
7. Electrons encircle the nucleus in electron shells or energy levels.
8. The innermost shell can hold up to two electrons. The outermost shell, holding the valence electrons, can have eight electrons, following the octet rule (rule of eight).
C. Isotopes and Atomic Weight (p. 55; Fig. 2.4; Table 2.3)
1. Isotopes vary in their number of neutrons.
2. All isotopes of the same element behave the same chemically.
3. Atomic weight considers the average mass of the atoms in a sample of an element.
D. Ions (p. 56; Fig. 2.5; Transp. 21)
1. Ions are charged particles (not electrically neutral).
2. Formation of ions is called ionization.
3. An anion has gained an electron, and thus carries an extra negative charge.
4. A cation has lost an electron, and bears a positive charge.
5. The charge of an ion is its valence.
E. Electrolytes (p. 57)
1. Electrolytes are molecules that ionize in water, forming a solution that can conduct electricity.
2. Electrolytes are essential to nerve and muscle function.
F. Free Radicals (p. 57)
1. A free radical contains an odd number of electrons, and tends to be reactive and destructive to other molecules.
2. Free radicals combine quickly with other molecules, converting them into free radicals, triggering chain reactions that lead to cell damage and death.
3. Antioxidants are one mechanism that neutralizes free radicals, in particular neutralizing the free radicals of oxygen.
4. Selenium and vitamin E are two dietary antioxidants.
II. Molecules, Compounds, and Chemical Bonds (p. 58)
A. Molecules and Compounds (p. 58)
1. Two or more atoms combined are called molecules.
2. When molecules are made up of two or more different elements, they are called compounds.
B. Chemical Formulae (p. 58; Fig. 2.6; Transp. 22)
1. The simplest way of representing a molecule is by using a molecular formula.
2. Structural isomers have the same atomic compositions, but with different atomic arrangements.
3. Structural formulae are used to show the location of each atom.
C. Molecular Weight (p. 58)
1. The molecular weight (MW) of a compound is obtained by adding the atomic weights of its atoms.
D. Chemical Bonds (p. 58; Figs. 2.7 - 2.10; Transps. 23, 24; Table 2.4)
1. A chemical bond is an attraction between atoms, usually to form stable valence shells.
2. Ionic bonds (p. 58; Fig. 2.7)
a. Ionic bonds are formed when two oppositely charged atoms (ions) are attracted to each other, as in the salt molecule (NaCl).
b. Ionic compounds readily form crystals.
c. Ionic bonds are weak because ions tend to dissociate in water.
3. Covalent Bonds (p. 59; Figs. 2.8 - 2.10; Transps. 23, 24)
a. In covalent bonds, two atoms share valence electrons to form stable valence shells.
b. A single covalent bond involves the sharing of a single pair of electrons; in a double bond, two pairs are shared.
c. When electrons are equally shared, a nonpolar covalent bond is formed.
d. Polar covalent bonds form when one nucleus has a stronger attraction for the electrons.
4. Hydrogen Bonds (p. 61; Fig. 2.10; Transp. 24; Table 2.4)
a. A weak hydrogen bond forms between the slightly positive hydrogen of one molecule and the slightly negative oxygen or nitrogen portion of another.
b. Hydrogen bonds are important for maintaining the three-dimensional structure of large, biologically important molecules.
III. Mixtures (p. 61)
1. A mixture occurs when substances are physically blended together, but do not combine chemically.
A. Solutions, Colloids, and Suspensions (p. 61; Table 2.5)
1. Solutions (p. 61; Fig. 2.11)
a. A solution is made up of particles (solute) mixed into a more abundant substance (solvent).
b. Solute particles are tiny, solutions are transparent and do not separate, and solute particles will pass through selectively permeable membranes.
2. Colloids (p. 62; Fig. 2.11)
a. A colloid is a cloudy mixture that remains permanently mixed, and its particles are too large to pass through a selectively permeable membrane.
b. Gelatin and agar are two examples of colloids.
3. Suspensions (p. 62; Fig. 2.11; Table 2.5)
a. Suspensions have larger particles and do not remain mixed, such as blood.
b. An emulsion is a suspension of one liquid into another.
B. Measures of Concentration (p. 62)
1. Solutions are described in terms of their concentration (amount of solute in a volume of solvent).
2. Weight per Volume (p. 63)
a. Concentration can be expressed as the weight of solute per volume of solution (g/L).
3. Percentages (p. 63)
a. Percentages can be expressed as weight per volume (w/v) or volume per volume (v/v).
4. Molarity (p. 63; Table 2.6; Fig. 2.12; Transp. 25)
a. Molarity is a measure of the number of moles of solute per liter of solution.
b. Biologists often work with millimolar solutions.
5. Electrolyte Concentrations (p. 64)
a. One equivalent of an electrolyte is the amount that would neutralize the charges of one mole of hydrogen or hydroxyl ions.
b. Concentration is often expressed as milliequivalents per liter (mEq/L).
IV. Acids, Bases, and pH (p. 64)
A. Acids and Bases (p. 64)
1. An acid is a molecule that releases a proton (hydrogen ion) in water.
2. A base is a proton acceptor.
B. pH (p. 65; Tables 2.7, 2.8)
1. Acidity is expressed as pH, a measure of the molarity of hydrogen ions.
2. pH is defined as the negative logarithm of hydrogen ion molarity.
3. A neutral solution has a pH of 7; solutions with a pH of less than 7 are acids; those with pH readings greater than 7 are bases.
4. Chemicals that resist changes in pH are buffers.
V. Chemical Reactions (p. 66)
A. Chemical Equations (p. 66)
1. A chemical reaction is the process in which a chemical bond is made or broken.
2. Reactants are the substances entering reactions; products are the result of the reaction.
3. A chemical equation is a symbolic representation of a reaction.
4. According to the law of conservation of mass, no quantities are altered during a reaction, so an equation must be balanced.
B. Classes of Reactions (p. 67; Figs. 2.13, 2.14; Transps. 26, 27)
1. In decomposition reactions, a larger molecule is broken down into smaller parts.
2. In synthesis reactions, two or more smaller molecules are joined to form a large one.
3. During exchange reactions, two molecules exchange groups of atoms.
C. Reversible Reactions (p. 67)
1. Reversible actions can go in either direction, depending upon the abundance of reactants or products, and are represented by a two-way arrow.
2. Reversible reactions exist in equilibrium state.
D. Reaction Rates (p. 67; Fig. 2.14; Transp. 27)
1. Reaction rates are dependent upon concentration of reactants, temperature, and the presence of catalysts.
VI. Energy (p. 68)
A. Work and Energy (p. 68)
1. Work means to move something; all the body's activities are a form of work.
2. Energy is the capacity to do work. Kinetic energy is the energy of motion. Potential energy is the capacity for two stationary objects to interact.
3. Chemical energy is potential energy stored within chemical bonds.
4. Heat is the kinetic energy of molecular motion.
B. Radioisotopes and Ionizing Radiation (p. 68)
1. Certain isotopes are unstable (called radioisotopes), and decay to form stable isotopes. The process of decay is radioactivity, which releases radiation.
2. Radioisotopes have half-lives, the time required for 50% of its atoms to decay to a stable state.
3. There are three kinds of ionizing radiation: alpha, beta, and gamma particles, the last being the most dangerous.
4. Radiation Exposure (p. 69; Table 2.9)
a. The average American is exposed to 295 mrem of background radiation annually.
VII. Thermodynamics and Metabolism (p. 70)
A. The Laws of Thermodynamics (p. 70)
1. Thermodynamics is the science of heat and energy conversions.
2. The first law of thermodynamics states that energy can be converted from one form to another, but it cannot be created or destroyed.
3. The second law of thermodynamics states that in every energy transfer, some energy is lost as heat and is no longer available to do work.
4. Free energy is the energy available in a system to do work.
5. A system's degree of disorder is called entropy.
B. Exergonic and Endergonic Reactions (p. 71)
1. Catabolism consists of energy-releasing (exergonic) decomposition reactions.
2. Anabolism consists of synthesis (endergonic) reactions that require energy input.
C. Oxidation and Reduction (p. 71; Table 2.10)
1. Oxidation occurs in a chemical reaction in which a molecule gives up electrons and releases free energy. Whatever took the electrons is the oxidizing agent (electron acceptor); the donor was oxidized.
2. Reduction takes place when a molecule accepts electrons. The electron donor is the reducing agent, or electron donor.
3. Oxidation and reduction always accompany one another in oxidation-reduction (redox) reactions.
CHAPTER ESSAY: Radioisotopes in Research, Diagnosis, and Therapy (p. 72; Figs. E.1 - E.3)
i. Despite their hazardous nature, radioisotopes are useful in the diagnosis and treatment of disease.
ii. Autoradiography has yielded abundant information about physiology.
iii. Radioactive tracers are used in clinical diagnosis, especially for thyroid disease.
iv. Radiotherapy is used to treat cancerous tumors.
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