Basic Organic Nomenclature


Stereochemistry in Cyclic Alkanes

Structural or constitutional isomers are compounds with the same number and types of atoms, but bonded together in different arrangements. These types of compounds will have different names as the chains of carbon atoms will differ. In cyclic structures it is possible to have another type of isomer, a stereo isomer (specifically a geometric isomer). This occurs because it is now possible to have atoms bonded together in the same arrangement, but in different locations in space. This is due to the fact that there can be no rotation about the carbon-carbon bonds in the ring, at least not without breaking a bond, a feat that is possible in non-cyclic alkanes. (Rotation about a C-C single bond (a sigma bond) is possible at room temperatures, but these different conformations of the molecule are not isomers, but rather are referred to as conformers).


For example compare the two isomers of 1,2-dimethylcyclopropane:

Isomer 1
Isomer 2

You should note:

The two compounds can be inter-converted only by breaking a C-C bond in the ring. This will not occur normally so the two molecules are different and their names needs to reflect this difference.

These geometric isomers are named with an additional prefix to indicate the relative location of the two substituents. Isomer 1, with the two methyl groups on opposite sides of the ring is the trans- isomer (note, it is usually in italics). Trans indicates the substituents are on opposite sides of the ring to one another. Isomer 2 is the cis- isomer, cis indicates that the substituents are on the same side of the ring.

Thus the correct name for the isomers are trans-1,2-dimethylcyclopropane (Isomer 1) and, cis-1,2-dimethylcyclopropane (Isomer 2).



The following examples will help illustrate this idea further. You should note there are several conventions in representing three dimensional information in line diagrams. Solid lines are assumed to be in the plane of the page, solid wedges come out of the page towards you, and dashed wedges go back into, or behind, the plane of the pages. There are some exceptions to these rules for specific molecules or types of drawings, these will be pointed out as they arrive.
 
 
Compound
Line Diagram
Molecular Model
trans-1-ethyl-2-methylcyclobutane
cis-1,3-dimethylcyclopentane
cis-1,2-dimethylcyclohexane

(This is not a good diagram)

cis-1,2-dimethylcyclohexane

(This is a better diagram)

cis-1,2-dimethylcyclohexane

(This is also a good diagram
see the 3D model)

trans-1,2-dimethylcyclohexane

Note: the last two line diagrams are a standard way of drawing a cyclohexane ring. This view is intended to represent the ring as viewed on edge. The axial groups are then displayed as vertical lines up or down from the ring carbons, and the equatorial groups are approximately horizontal lines. Compare it to the 3 dimensional model and it will become apparent.


Tutorial Quiz 3

Next Page: Polycyclic Alkanes

Return to Index