Sites with Molecules
Sites with Molecules
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No. |
Site |
Content / Viewer |
Comments |
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1 |
1100 organic molecules Chime Much more than just pictures for some |
pdb format, several indexes, multiple bonds not necessarily indicated |
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2 |
400 structures Chime presentation |
organic and inorganic, instructions |
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3 |
Structure Database 250 molecules and ions Chime, WebLab Viewer Chime Radii periodic table of the radii |
Not idealized, double bonds not necessarily indicated |
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4 |
http://www.dcu.ie/~chemist/pratt/pdb/pdb.htm then select "javascript version" |
400 molecules Chime, use "HTML version" to keep measurements window |
two windows allows comparisons Ireland |
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5 |
Molecules R Us Selecting "PDB Viewer" as the output requested gives Chime |
PDB Database |
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6 |
Crystal lattice structures, select a lattice to see the actual compounds available Chime works if you click "examine the structure" |
If no atoms are visible change to ball and stick or spacefill display |
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7 |
MathMol, Selection of "PDB" brings up full screen Chime image, mostly biological molecules |
water, ice, |
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8 |
http://info.bio.cmu.edu/Courses/BiochemMols/BCMolecules.html |
Molecular models for biochemistry, Chime presentations amino acids, peptides, proteins, nucleic acids, nucleotides and more |
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9 |
http://iumsc11.chem.indiana.edu/common/Weird_and_neat/buckyball/buckministerfullerene.htm |
Fullerene gallery, built-in viewer |
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10 |
Many organic and inorganic structures in a small Chime window, also other results of structure calculation |
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11 |
Indiana Univ., Common molecules section growing, includes elements, minerals and many others. Chime is an option |
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12 |
http://www.shef.ac.uk/chemistry/web-elements/main/index.html |
WebElements periodic table, an excellent resource, includes Chime image of each crystal structure Earlier, less complete version of WebElements, faster server for N. America and adequate for many questions. |
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13 |
16 coordination compounds, small Chime windows |
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14 |
Crystal structures of Minerals |
Calgary |
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15 |
Structures and info about cmpds , small Chime window |
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16 |
Klotho select compound for GIF image and then "interactive viewer" for Chime 439 mostly biochemical cmpds, nomenclature carefully defined |
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17 |
1.5MB animation of liquid water |
H bond lines form and break |
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18 |
http://www-wilson.ucsd.edu/education/gchem/statesofmatter/stunit.html |
Animation of unit cells, 4.2MB
GenChem site |
UCSD genchem site |
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19 |
select "vibrations", mpeg movie, select docking and mpeg movie (2.7MB) |
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20 |
Select frequency to view motion |
ignore error message |
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21 |
http://www.cchem.berkeley.edu/ChemResources/Vibrations/index.html |
some odd vibrations of benzene |
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22 |
Atomic orbitals, single drawing of each through g and rotating animation |
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23 |
http://www-wilson.ucsd.edu/education/gchem/atomorbs/aovis.html |
Slides of text and brief animations of orbitals |
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24 |
Chart of the nuclides select region, select nuclide for detailed info no abundances |
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25 |
Dendrimers as GIF's |
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26 |
Smell Database 2 views, not Chime |
pdb file could be viewed with other viewers |
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27 |
Making Matter Crystal structures including basic ones, gems and minerals, superconductors, and others |
VRML Crystal structures |
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28 |
Inorganic crystals |
Chime, and some discussion |
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29 |
http://www.fatburen.org/chemlibris/chemlibris/shockmenu.html |
Animated SN1, SN2 |
Reguires Shockwave |
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30 |
Chime tutorial on hemoglobin and sickle cell |
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31 |
Interactive Biochemistry at Virginia |
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32 |
Molecule of the Month |
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